| Dr. John Albums |
| album | date | label |
| The Very Best Of Dr. John | 25 Apr 1995 | Elektra / Wea |
| In the Right Place | 28 Jun 1990 | Rhino/Elektra |
| Gris Gris | | Rhino/Elektra |
| Gris-Gris | 9 May 2000 | Collector's Choice |
| Dr. John's Gumbo | 28 Jun 1990 | Rhino/Elektra |
| The Ultimate Dr. John | | |
| The Best Of The Parlophone Years | 28 Mar 2005 | EMI UK |
| Goin' Back to New Orleans | 16 Jun 1992 | Warner Bros / Wea |
| Gumbo | | |
| Destively Bonnaroo | | Rhino/Elektra |
| The Sun, Moon & Herbs | 31 Aug 1971 | Rhino/Elektra |
| Desitively Bonnaroo | 8 Mar 2005 | DBK Works |
| The Ultimate | | Warner Special Products |
| The Masters | 10 Jul 2011 | Synergie OMP |
| Duke Elegant | 1 Mar 2003 | EMI UK |
| A Night In New Orleans | 18 Feb 2009 | NPL |
| Babylon | 6 Nov 2001 | Rhino/Elektra |
| In a Sentimental Mood | 25 Oct 1990 | Rhino/Warner Bros. |
| Anutha Zone | 3 Mar 2003 | Capitol |
| All by Hisself: Live at the Lonestar | 2003 | |
| Remedies | 1970 | Rhino/Elektra |
| Creole Moon | 1 Mar 2003 | EMI UK |
| Mercernary | 1 May 2006 | EMI UK |
| Television | 10 Nov 1998 | Universal Special Markets |
| Afterglow | 4 Jul 2000 | Universal Music Division Jazz |
| A Little Closer to My Home | 21 Apr 2011 | Demon S&C |
| Dr. John Live – 20 Rock And Roll Hall Of Fame & New Orleans Classics | 10 May 2011 | HYENA Records |
| N'awlinz: Dis, Dat Or D'Udda | 17 Jun 2004 | Parlophone |
| The Anthology | 11 Apr 2006 | Master Classics |
| Right Place, Right Time: Live at Tipitina's | | |
| Next Hex | 26 Oct 1999 | Cleopatra |
| Dr. John Plays Mac Rebennack | 15 Dec 1998 | Classics Records Fr |
| City Lights | 28 Jul 2008 | Universal Music Colombia S.A. |
| The Essentials | | |
| Trippin' Live | | Wind-up |
| Mos' Scocious: The Dr. John Anthology (disc 1) | 1993 | |
| Cat and Mouse Game | 10 Jul 2011 | Synergie OMP |
| Dr. John Plays Mac Rebennack The Legendary Sessions Vol. 2 | | |
| Dr. John Plays Mac Rebennack The Legendary Sessions V. 1 | | |
| All by Hisself (Live At The Lonestar) | | HYENA Records |
| In The Night | 26 Jul 2010 | Music Company OMP |
| Zu Zu Man | 21 Mar 2011 | Charly Records |
| Live At Montreux 1995 | 26 Feb 2008 | Fontana South |
| Careless Love | 15 Jun 2004 | Blue Note |
| N'Awlinz: Dis Dat or d'Udda | | |
| Rhino Hi-Five: Dr. John | | Rhino/Elektra |
| Live at Tipitina's: Mardi Gras '89 | 21 Mar 2006 | HYENA Records |
| Trader John's Crawfish Soiree | 1 Mar 2007 | Blue Label - SPV Label |
| Sippiana Hericane | 21 Nov 2005 | EMI UK |
| The Essential Recordings | 25 Apr 2006 | Purple Pyramid - Cleopatra |
| Loser For You Baby | 10 Aug 2010 | Monaco Entertainment Corporation |
| I Don'T Wanna Know | | EMI UK |
| Very Best of | | |
| Hollywood Be Thy Name | 23 Aug 2011 | Capitol Catalog |
| Just Like a Mirror | 21 Apr 2011 | Demon S&C |
| Legends | 13 Sep 2010 | Play Digital |
| Swamp Blues | 6 Feb 2007 | Rremark |
| Next Hex: The Nashville Sessions | 27 Sep 2005 | Cleopatra Records |
| Cut Me While I'm Hot | 10 Jul 2011 | Synergie OMP |
| American Legend, VOL.2 | 14 Oct 2008 | American Legends |
| The Brightest Smile in Town | 2 Oct 1989 | Clean Cuts |
| Definitive Pop Collection | | |
| Th Early Times of Dr. John | 30 Oct 2007 | Synergy Records |
| Trader John | 21 Mar 2011 | Charly Records |
| The Very Best Of | | |
| American Legend, VOL.1 | 14 Oct 2008 | American Legends |
| Funky New Orleans | 25 Apr 2000 | |
| Cut Me While I'm Hot: The Sixties Sessions | | |
| The Great Dr. John | 1 Jun 2006 | San Juan Music Group Ltd. |
| Right Place Wrong Time | 1973 | |
| Tango Palace | | |
| Mean Cheatin' Woman | 17 Oct 2011 | Orange Leisure |
| Piano Blues - A Film By Clint Eastwood | 9 Sep 2003 | Columbia/Legacy |
| Mos' Scocious: The Dr. John Anthology (disc 2) | | |
| Plays Mac Rebennack | | |
| Songs by Dr. John | 12 May 2006 | San Juan Music Group Ltd. |
| Dr. John Plays Mac Rebennack: The Legendary Sessions, Vol. 1 | 8 Oct 2002 | |
| N'Awlinz - Dis Dat Or D'Udda | | |
| Live at Montreux, 1995 | | |
| The Time Had Come | 26 Jul 2010 | Music Company OMP |
| All By Hisself | | |
| What Goes Around Comes Around | | |
| I Pulled the Cover Off You Two Lovers | 23 May 2006 | |
| Woman Is the Root of All Evil | | |
| N'Awlinz Dis, Dat, or D'Udda | 14 Jun 2004 | EMI UK |
| Right Place, Right Time | | HYENA Records |
| The Night Rider | 8 Feb 2011 | American Legends |
| Disney's Greatest Hits (Disc 1) | | Edel |
| Diggin' Dr. John | | Rhino |
| Right Place, Wrong Time & Other Hits | | |
| Crawfish Soiree | | |
| All by Hisself (Live at the Lonestar, NYC, 22-3 Dec 1986) | | HYENA Records |
| At His Best | | |
| Medical School | | |
| On a Mardi Gras Day | 31 Oct 1994 | Great Southern |
| Dr. John and His New Orleans Congregation | | |
| Essential Recordings | | |
| An Introduction to Dr. John | | |
| Storm Warning | | |
| The Ear Is on Strike | 19 Oct 2001 | |
| Anthology | | |
| The City That Care Forgot | | 429 Records |
| Six Play: Dr. John - EP | 13 Sep 2010 | Play Digital |
| In The Right Place / Gumbo | | |
| Mos' Scocious : The Dr. John Anthology | | |
| The Gold Collection | | |
| The Sun Moon and Herbs | | |
| New Orleans Man | | |
| Crazy Cajun Recordings | | |
| Hoodoo: The Collection | | |
| Dr. John - Live at Montreux 1995 | | |
| Golden Legends | | |
| Early Prescriptions | | |
| Mos'scocious: Dr. John Anthology | | |
| Storm Warning: the Early Sessions of Mac 'dr. John' Rebennack | | |
| The Legendary Sessions Vol.2 | | |
| Right Place Right Time - Live at Tipitina's | | |
| Very Best of | | |
| Fucsia Blues | | |
| Boogie to Heaven | | |
| Ultimate | | |
| Next Hex-the Nashville Sessi.' | | |
| After Glow | | |
| Live in Montreux 1995/86 | | |
