| Junior Wells Albums |
| album | date | label |
| Hoodoo Man Blues | 25 Oct 2004 | Analogue Catalog UK |
| Best of the Vanguard Years | 2 Mar 1998 | Vanguard Records |
| Come On In This House | 16 Jun 2009 | Telarc |
| Live At Buddy Guy's Legends | 16 Jun 2009 | Telarc |
| Calling All Blues | 5 Jul 2011 | Airline Records LLC |
| Blues Hit Big Town | 25 Oct 2004 | Delmark |
| Southside Blues Jam | 11 Oct 2004 | Delmark |
| Everybody's Gettin' Some | 16 Jun 2009 | Telarc |
| An Introduction to Junior Wells | 8 Aug 2006 | Fuel Records |
| On Tap | 25 Oct 2004 | Delmark |
| Live at Theresa's 1975 | 29 Apr 2008 | Delmark |
| Vanguard Visionaries | 12 Jun 2007 | Vanguard Records |
| Live Around The World: The Best Of Junior Wells | | Columbia |
| Blues Six Pack | 9 Jun 2009 | Concord Records (Canada) |
| It's My Life, Baby! | 25 Oct 1990 | Vanguard Records |
| Better Off With the Blues | | Telarc |
| Coming at You | 12 Jun 1990 | Vanguard Records |
| Keep On Steppin': The Best of Junior Wells | | |
| It's My Life Baby | 25 Oct 1990 | Vanguard Records |
| South Side Blues Jam | | |
| Live at the Golden Bear | 21 Jul 1998 | Mca Special Products |
| Sings Live At The Golden Bear | 21 Feb 2006 | PSM RECORDS |
| Pleading the Blues | 29 Nov 1993 | Evidence |
| You're Tuff Enough: The Blue Rock Studio Recordings | 21 Jul 1998 | Polygram Records |
| Keep on Steppin' | | |
| Undisputed Godfather of Blues | 1993 | |
| Live Around the World | 29 Jan 2002 | Sony |
| Messin' With the Kid: Junior Wells 1957-1963 | 15 Jul 1991 | |
| 1957-1966 | 15 Jul 1991 | Paula Records |
| Best of Vanguard Years | | |
| Roots Of The Blues - Urban Blues | | Vanguard |
| Southside Blues Jam (feat. Buddy Guy and Otis Spann) | | High Water |
| Messin with the Kid: The Complete Chief/Profile/U.S.A. Sessions 1957-1963 | 17 Feb 2003 | P-Vine Japan |
| Its My Life Baby | | |
| Alone and Acoustic | | |
| Junior Wells and Friends | | |
| Les Incontournables | | |
| Keep on Steppin | | |
| This Is the Bluesharmonica | | |
| Save at Buddy Guys Legend | | |
| Live Around the Worl | | |
